IL_7P7Q_068
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 7P7Q|1|A|G|1741
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_068 not in the Motif Atlas
- Homologous match to IL_7RQB_068
- Geometric discrepancy: 0.0797
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
7P7Q|1|A|C|1728
7P7Q|1|A|G|1729
7P7Q|1|A|U|1730
7P7Q|1|A|A|1731
7P7Q|1|A|A|1732
7P7Q|1|A|C|1733
*
7P7Q|1|A|G|1738
7P7Q|1|A|G|1739
7P7Q|1|A|A|1740
7P7Q|1|A|G|1741
7P7Q|1|A|A|1742
7P7Q|1|A|A|1743
7P7Q|1|A|G|1744
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: