IL_7P7Q_087

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_087 not in the Motif Atlas

Geometric match to IL_4WF9_017

Geometric discrepancy: 0.1782

The information below is about IL_4WF9_017

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

95

Unit IDs

7P7Q|1|A|A|2121
7P7Q|1|A|U|2122
7P7Q|1|A|G|2123
*
7P7Q|1|A|C|2192
7P7Q|1|A|U|2193
7P7Q|1|A|U|2194

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

ARE-ABC-F family resistance factor PoxtA

Chain F

50S ribosomal protein L1