IL_7P7Q_091

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

7P7Q|1|A|G|2216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_091 not in the Motif Atlas

Geometric match to IL_4LFB_036

Geometric discrepancy: 0.3613

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

76

Unit IDs

7P7Q|1|A|C|2215
7P7Q|1|A|G|2216
7P7Q|1|A|C|2217
*
7P7Q|1|A|G|2233
7P7Q|1|A|G|2234

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2

Chain Z

50S ribosomal protein L28