IL_7P7Q_102

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

7P7Q|1|A|A|2585, 7P7Q|1|A|C|2586

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_102 not in the Motif Atlas

Homologous match to IL_4WF9_096

Geometric discrepancy: 0.0874

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.3

Basepair signature

cWW-cWW

Number of instances in this motif group

26

Unit IDs

7P7Q|1|A|C|2525
7P7Q|1|A|G|2526
*
7P7Q|1|A|C|2584
7P7Q|1|A|A|2585
7P7Q|1|A|C|2586
7P7Q|1|A|G|2587

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain M

50S ribosomal protein L13