IL_7P7Q_109

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UU*AUUG

Length

6 nucleotides

Bulged bases

7P7Q|1|A|U|2725, 7P7Q|1|A|U|2726

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_109 not in the Motif Atlas

Homologous match to IL_5J7L_349

Geometric discrepancy: 0.0886

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

7P7Q|1|A|U|2708
7P7Q|1|A|U|2709
*
7P7Q|1|A|A|2724
7P7Q|1|A|U|2725
7P7Q|1|A|U|2726
7P7Q|1|A|G|2727

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L17

Chain S

50S ribosomal protein L19