IL_7P7Q_115
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAUACA*UUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_115 not in the Motif Atlas
- Homologous match to IL_5TBW_373
- Geometric discrepancy: 0.5952
- The information below is about IL_5TBW_373
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- No text annotation
- Motif group
- IL_10207.3
- Basepair signature
- cWW-cWW-L-cSW-L-R-L-cWW-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7P7Q|1|B|G|21
7P7Q|1|B|G|22
7P7Q|1|B|A|23
7P7Q|1|B|U|24
7P7Q|1|B|A|25
7P7Q|1|B|C|26
7P7Q|1|B|A|27
*
7P7Q|1|B|U|53
7P7Q|1|B|U|54
7P7Q|1|B|A|55
7P7Q|1|B|A|56
7P7Q|1|B|G|57
7P7Q|1|B|C|58
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain J
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
Coloring options: