IL_7P7Q_132

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUC*GA

Length

5 nucleotides

Bulged bases

7P7Q|1|a|U|394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_132 not in the Motif Atlas

Geometric match to IL_4LFB_014

Geometric discrepancy: 0.1104

The information below is about IL_4LFB_014

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

7P7Q|1|a|U|393
7P7Q|1|a|U|394
7P7Q|1|a|C|395
*
7P7Q|1|a|G|418
7P7Q|1|a|A|419

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S16