IL_7P7Q_135
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGAAGAAG*CGUAAAA
- Length
- 15 nucleotides
- Bulged bases
- 7P7Q|1|a|A|438
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_135 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1266
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
7P7Q|1|a|U|435
7P7Q|1|a|G|436
7P7Q|1|a|A|437
7P7Q|1|a|A|438
7P7Q|1|a|G|439
7P7Q|1|a|A|440
7P7Q|1|a|A|441
7P7Q|1|a|G|442
*
7P7Q|1|a|C|453
7P7Q|1|a|G|454
7P7Q|1|a|U|455
7P7Q|1|a|A|456
7P7Q|1|a|A|457
7P7Q|1|a|A|458
7P7Q|1|a|A|459
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
Coloring options: