3D structure

PDB id
7PD3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUAAACC*GAUGAAAAAACCAAG
Length
22 nucleotides
Bulged bases
7PD3|1|A|A|1804
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PD3|1|A|C|1672
7PD3|1|A|U|1673
7PD3|1|A|A|1674
7PD3|1|A|A|1675
7PD3|1|A|A|1676
7PD3|1|A|C|1677
7PD3|1|A|C|1678
*
7PD3|1|A|G|1797
7PD3|1|A|A|1798
7PD3|1|A|U|1799
7PD3|1|A|G|1800
7PD3|1|A|A|1801
7PD3|1|A|A|1802
7PD3|1|A|A|1803
7PD3|1|A|A|1804
7PD3|1|A|A|1805
7PD3|1|A|A|1811
7PD3|1|A|C|1812
7PD3|1|A|C|1813
7PD3|1|A|A|1814
7PD3|1|A|A|1815
7PD3|1|A|G|1816

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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