IL_7PJS_081

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAGCCUU*AUGUUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJS|1|A|G|2100
7PJS|1|A|A|2101
7PJS|1|A|G|2102
7PJS|1|A|C|2103
7PJS|1|A|C|2104
7PJS|1|A|U|2105
7PJS|1|A|U|2106
*
7PJS|1|A|A|2184
7PJS|1|A|U|2185
7PJS|1|A|G|2186
7PJS|1|A|U|2187
7PJS|1|A|U|2188
7PJS|1|A|U|2189

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9