IL_7PJS_082

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UGAUGUGUAGGAUAG*CCUUUAA

Length

22 nucleotides

Bulged bases

7PJS|1|A|U|2111, 7PJS|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJS|1|A|U|2106
7PJS|1|A|G|2107
7PJS|1|A|A|2108
7PJS|1|A|U|2109
7PJS|1|A|G|2110
7PJS|1|A|U|2111
7PJS|1|A|G|2112
7PJS|1|A|U|2113
7PJS|1|A|A|2114
7PJS|1|A|G|2115
7PJS|1|A|G|2116
7PJS|1|A|A|2117
7PJS|1|A|U|2118
7PJS|1|A|A|2119
7PJS|1|A|G|2120
*
7PJS|1|A|C|2178
7PJS|1|A|C|2179
7PJS|1|A|U|2180
7PJS|1|A|U|2181
7PJS|1|A|U|2182
7PJS|1|A|A|2183
7PJS|1|A|A|2184

Current chains

Chain A

23S ribosomal RNA

Nearby chains