3D structure

PDB id
7PJT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)
Experimental method
ELECTRON MICROSCOPY
Resolution
6 Å

Loop

Sequence
GGGAAAC*GGAAGAUGUAACGGGGC
Length
24 nucleotides
Bulged bases
7PJT|1|A|A|1127, 7PJT|1|A|U|1130
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJT|1|A|G|1024
7PJT|1|A|G|1025
7PJT|1|A|G|1026
7PJT|1|A|A|1027
7PJT|1|A|A|1028
7PJT|1|A|A|1029
7PJT|1|A|C|1030
*
7PJT|1|A|G|1124
7PJT|1|A|G|1125
7PJT|1|A|A|1126
7PJT|1|A|A|1127
7PJT|1|A|G|1128
7PJT|1|A|A|1129
7PJT|1|A|U|1130
7PJT|1|A|G|1131
7PJT|1|A|U|1132
7PJT|1|A|A|1133
7PJT|1|A|A|1134
7PJT|1|A|C|1135
7PJT|1|A|G|1136
7PJT|1|A|G|1137
7PJT|1|A|G|1138
7PJT|1|A|G|1139
7PJT|1|A|C|1140

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain B
5S ribosomal RNA; 5S rRNA
Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain M
50S ribosomal protein L16

Coloring options:

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