IL_7PJT_142

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

UAGAGG*CUGGA

Length

11 nucleotides

Bulged bases

7PJT|1|a|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|a|U|662
7PJT|1|a|A|663
7PJT|1|a|G|664
7PJT|1|a|A|665
7PJT|1|a|G|666
7PJT|1|a|G|667
*
7PJT|1|a|C|739
7PJT|1|a|U|740
7PJT|1|a|G|741
7PJT|1|a|G|742
7PJT|1|a|A|743

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain f

30S ribosomal protein S6

Chain o

30S ribosomal protein S15

Chain r

30S ribosomal protein S18