IL_7PJT_154

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

7PJT|1|a|U|1025, 7PJT|1|a|C|1027, 7PJT|1|a|U|1029, 7PJT|1|a|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|a|G|1003
7PJT|1|a|A|1004
7PJT|1|a|A|1005
7PJT|1|a|G|1006
7PJT|1|a|U|1007
7PJT|1|a|U|1008
*
7PJT|1|a|A|1021
7PJT|1|a|A|1022
7PJT|1|a|U|1023
7PJT|1|a|G|1024
7PJT|1|a|U|1025
7PJT|1|a|G|1026
7PJT|1|a|C|1027
7PJT|1|a|C|1028
7PJT|1|a|U|1029
7PJT|1|a|U|1030
7PJT|1|a|C|1031
7PJT|1|a|G|1032
7PJT|1|a|G|1033
7PJT|1|a|G|1034
7PJT|1|a|A|1035
7PJT|1|a|A|1036
7PJT|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14