IL_7PJT_156

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GCUGCAUG*CAUG(2MG)C

Length

14 nucleotides

Bulged bases

7PJT|1|a|C|1054

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|a|G|1050
7PJT|1|a|C|1051
7PJT|1|a|U|1052
7PJT|1|a|G|1053
7PJT|1|a|C|1054
7PJT|1|a|A|1055
7PJT|1|a|U|1056
7PJT|1|a|G|1057
*
7PJT|1|a|C|1203
7PJT|1|a|A|1204
7PJT|1|a|U|1205
7PJT|1|a|G|1206
7PJT|1|a|2MG|1207
7PJT|1|a|C|1208

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14

Chain w

Transfer RNA; tRNA

Chain z

mRNA