IL_7PJT_196
3D structure
- PDB id
- 7PJT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- UGCAUG*CAUG
- Length
- 10 nucleotides
- Bulged bases
- 7PJT|1|a|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJT_196 not in the Motif Atlas
- Homologous match to IL_6CZR_365
- Geometric discrepancy: 0.3421
- The information below is about IL_6CZR_365
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_45699.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7PJT|1|a|U|1052
7PJT|1|a|G|1053
7PJT|1|a|C|1054
7PJT|1|a|A|1055
7PJT|1|a|U|1056
7PJT|1|a|G|1057
*
7PJT|1|a|C|1203
7PJT|1|a|A|1204
7PJT|1|a|U|1205
7PJT|1|a|G|1206
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain w
- Transfer RNA; tRNA
- Chain z
- mRNA
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