IL_7PJT_197

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CCG(4OC)CC*G(UR3)AACAAG

Length

14 nucleotides

Bulged bases

7PJT|1|a|C|1400, 7PJT|1|a|A|1503

QA status

Modified nucleotides: 4OC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|a|C|1399
7PJT|1|a|C|1400
7PJT|1|a|G|1401
7PJT|1|a|4OC|1402
7PJT|1|a|C|1403
7PJT|1|a|C|1404
*
7PJT|1|a|G|1497
7PJT|1|a|UR3|1498
7PJT|1|a|A|1499
7PJT|1|a|A|1500
7PJT|1|a|C|1501
7PJT|1|a|A|1502
7PJT|1|a|A|1503
7PJT|1|a|G|1504

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain v

Transfer RNA; tRNA

Chain z

mRNA