IL_7PJU_001
3D structure
- PDB id
- 7PJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJU_001 not in the Motif Atlas
- Geometric match to IL_4WF9_001
- Geometric discrepancy: 0.0815
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PJU|1|A|G|24
7PJU|1|A|U|25
7PJU|1|A|G|26
7PJU|1|A|G|27
7PJU|1|A|A|28
7PJU|1|A|U|29
7PJU|1|A|G|30
*
7PJU|1|A|C|510
7PJU|1|A|U|511
7PJU|1|A|G|512
7PJU|1|A|A|513
7PJU|1|A|A|514
7PJU|1|A|A|515
7PJU|1|A|C|516
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain Q
- 50S ribosomal protein L20
- Chain S
- Ribosomal protein L22
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