IL_7PJU_156

3D structure

PDB id

7PJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

7PJU|1|a|U|1025, 7PJU|1|a|C|1027, 7PJU|1|a|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJU|1|a|G|1003
7PJU|1|a|A|1004
7PJU|1|a|A|1005
7PJU|1|a|G|1006
7PJU|1|a|U|1007
7PJU|1|a|U|1008
*
7PJU|1|a|A|1021
7PJU|1|a|A|1022
7PJU|1|a|U|1023
7PJU|1|a|G|1024
7PJU|1|a|U|1025
7PJU|1|a|G|1026
7PJU|1|a|C|1027
7PJU|1|a|C|1028
7PJU|1|a|U|1029
7PJU|1|a|U|1030
7PJU|1|a|C|1031
7PJU|1|a|G|1032
7PJU|1|a|G|1033
7PJU|1|a|G|1034
7PJU|1|a|A|1035
7PJU|1|a|A|1036
7PJU|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14