IL_7PJV_156

3D structure

PDB id

7PJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

7PJV|1|a|U|1025, 7PJV|1|a|C|1027, 7PJV|1|a|U|1030, 7PJV|1|a|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJV|1|a|G|1003
7PJV|1|a|A|1004
7PJV|1|a|A|1005
7PJV|1|a|G|1006
7PJV|1|a|U|1007
7PJV|1|a|U|1008
*
7PJV|1|a|A|1021
7PJV|1|a|A|1022
7PJV|1|a|U|1023
7PJV|1|a|G|1024
7PJV|1|a|U|1025
7PJV|1|a|G|1026
7PJV|1|a|C|1027
7PJV|1|a|C|1028
7PJV|1|a|U|1029
7PJV|1|a|U|1030
7PJV|1|a|C|1031
7PJV|1|a|G|1032
7PJV|1|a|G|1033
7PJV|1|a|G|1034
7PJV|1|a|A|1035
7PJV|1|a|A|1036
7PJV|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14