IL_7PJW_169
3D structure
- PDB id
- 7PJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GU(5MC)AC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- 7PJW|1|a|A|1492, 7PJW|1|a|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJW_169 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.2119
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PJW|1|a|G|1405
7PJW|1|a|U|1406
7PJW|1|a|5MC|1407
7PJW|1|a|A|1408
7PJW|1|a|C|1409
*
7PJW|1|a|G|1491
7PJW|1|a|A|1492
7PJW|1|a|A|1493
7PJW|1|a|G|1494
7PJW|1|a|U|1495
7PJW|1|a|C|1496
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain w
- Transfer RNA; tRNA
- Chain z
- mRNA
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