3D structure

PDB id
7PJW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CAUGG*CUGGG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJW|1|a|C|1412
7PJW|1|a|A|1413
7PJW|1|a|U|1414
7PJW|1|a|G|1415
7PJW|1|a|G|1416
*
7PJW|1|a|C|1484
7PJW|1|a|U|1485
7PJW|1|a|G|1486
7PJW|1|a|G|1487
7PJW|1|a|G|1488

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain A
Large subunit ribosomal RNA; LSU rRNA
Chain l
30S ribosomal protein S12

Coloring options:

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