IL_7PJX_155

3D structure

PDB id

7PJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

7PJX|1|a|U|1025, 7PJX|1|a|C|1027, 7PJX|1|a|U|1030, 7PJX|1|a|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJX|1|a|G|1003
7PJX|1|a|A|1004
7PJX|1|a|A|1005
7PJX|1|a|G|1006
7PJX|1|a|U|1007
7PJX|1|a|U|1008
*
7PJX|1|a|A|1021
7PJX|1|a|A|1022
7PJX|1|a|U|1023
7PJX|1|a|G|1024
7PJX|1|a|U|1025
7PJX|1|a|G|1026
7PJX|1|a|C|1027
7PJX|1|a|C|1028
7PJX|1|a|U|1029
7PJX|1|a|U|1030
7PJX|1|a|C|1031
7PJX|1|a|G|1032
7PJX|1|a|G|1033
7PJX|1|a|G|1034
7PJX|1|a|A|1035
7PJX|1|a|A|1036
7PJX|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14