IL_7PJX_192
3D structure
- PDB id
- 7PJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- UGCAUGG*UCAUCAUG
- Length
- 15 nucleotides
- Bulged bases
- 7PJX|1|a|C|1054, 7PJX|1|a|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJX_192 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.1749
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7PJX|1|a|U|1052
7PJX|1|a|G|1053
7PJX|1|a|C|1054
7PJX|1|a|A|1055
7PJX|1|a|U|1056
7PJX|1|a|G|1057
7PJX|1|a|G|1058
*
7PJX|1|a|U|1199
7PJX|1|a|C|1200
7PJX|1|a|A|1201
7PJX|1|a|U|1202
7PJX|1|a|C|1203
7PJX|1|a|A|1204
7PJX|1|a|U|1205
7PJX|1|a|G|1206
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain w
- Transfer RNA; tRNA
- Chain z
- mRNA
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