3D structure

PDB id
7PJX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
Experimental method
ELECTRON MICROSCOPY
Resolution
6.5 Å

Loop

Sequence
CAUGGGAG*UGACUGGG
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJX|1|a|C|1412
7PJX|1|a|A|1413
7PJX|1|a|U|1414
7PJX|1|a|G|1415
7PJX|1|a|G|1416
7PJX|1|a|G|1417
7PJX|1|a|A|1418
7PJX|1|a|G|1419
*
7PJX|1|a|U|1481
7PJX|1|a|G|1482
7PJX|1|a|A|1483
7PJX|1|a|C|1484
7PJX|1|a|U|1485
7PJX|1|a|G|1486
7PJX|1|a|G|1487
7PJX|1|a|G|1488

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain A
Large subunit ribosomal RNA; LSU rRNA
Chain l
30S ribosomal protein S12

Coloring options:

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