IL_7PJY_009

3D structure

PDB id

7PJY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

7PJY|1|A|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PJY_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.5619

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7PJY|1|A|C|274
7PJY|1|A|C|275
7PJY|1|A|U|276
7PJY|1|A|G|277
7PJY|1|A|A|278
7PJY|1|A|A|279
7PJY|1|A|U|280
7PJY|1|A|C|281
*
7PJY|1|A|G|359
7PJY|1|A|U|360
7PJY|1|A|G|361
7PJY|1|A|A|362
7PJY|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains