IL_7PJY_040

3D structure

PDB id

7PJY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAG*CUCAC

Length

42 nucleotides

Bulged bases

7PJY|1|A|U|1061, 7PJY|1|A|U|1066, 7PJY|1|A|A|1067

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJY|1|A|G|1055
7PJY|1|A|G|1056
7PJY|1|A|A|1057
7PJY|1|A|U|1058
7PJY|1|A|G|1059
7PJY|1|A|U|1060
7PJY|1|A|U|1061
7PJY|1|A|G|1062
7PJY|1|A|G|1063
7PJY|1|A|C|1064
7PJY|1|A|U|1065
7PJY|1|A|U|1066
7PJY|1|A|A|1067
7PJY|1|A|G|1068
7PJY|1|A|A|1069
7PJY|1|A|A|1070
7PJY|1|A|G|1071
7PJY|1|A|C|1072
7PJY|1|A|A|1073
7PJY|1|A|G|1074
7PJY|1|A|C|1075
7PJY|1|A|C|1076
7PJY|1|A|A|1077
7PJY|1|A|U|1078
7PJY|1|A|C|1079
7PJY|1|A|A|1080
7PJY|1|A|U|1081
7PJY|1|A|U|1082
7PJY|1|A|U|1083
7PJY|1|A|A|1084
7PJY|1|A|A|1085
7PJY|1|A|A|1086
7PJY|1|A|G|1087
7PJY|1|A|A|1088
7PJY|1|A|A|1089
7PJY|1|A|A|1090
7PJY|1|A|G|1091
*
7PJY|1|A|C|1100
7PJY|1|A|U|1101
7PJY|1|A|C|1102
7PJY|1|A|A|1103
7PJY|1|A|C|1104

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain 5

50S ribosomal protein L10

Chain I

50S ribosomal protein L11

Chain x

Elongation factor G