3D structure

PDB id
7PJY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CCC*G(2MG)G
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7PJY_077 not in the Motif Atlas
Homologous match to IL_5J7L_322
Geometric discrepancy: 0.1271
The information below is about IL_5J7L_322
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJY|1|A|C|2064
7PJY|1|A|C|2065
7PJY|1|A|C|2066
*
7PJY|1|A|G|2444
7PJY|1|A|2MG|2445
7PJY|1|A|G|2446

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain E
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain w
Transfer RNA; tRNA
Chain y
Dipeptide (FME-PHE)

Coloring options:


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