IL_7PKQ_002
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UGC*GUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PKQ_002 not in the Motif Atlas
- Geometric match to IL_3MEI_002
- Geometric discrepancy: 0.1461
- The information below is about IL_3MEI_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
7PKQ|1|1|U|32
7PKQ|1|1|G|33
7PKQ|1|1|C|34
*
7PKQ|1|3|G|60
7PKQ|1|3|U|61
7PKQ|1|3|A|62
Current chains
- Chain 1
- S1 rRNA
- Chain 3
- S3 rRNA
Nearby chains
- Chain 2
- S2 rRNA
- Chain d
- uS4m
- Chain l
- uS12m
Coloring options: