IL_7PKQ_029

3D structure

PDB id

7PKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of the Chlamydomonas reinhardtii mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UG*CAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PKQ_029 not in the Motif Atlas

Homologous match to IL_6CZR_150

Geometric discrepancy: 0.4597

The information below is about IL_6CZR_150

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PKQ|1|3|U|367
7PKQ|1|3|G|368
*
7PKQ|1|4|C|114
7PKQ|1|4|A|115
7PKQ|1|4|G|116

Current chains

Chain 3

S3 rRNA

Chain 4

S4 rRNA

Nearby chains

Chain m

Mitochondrial ribosomal protein S13

Chain s

uS19m