IL_7PKQ_044

3D structure

PDB id

7PKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of the Chlamydomonas reinhardtii mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UAC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PKQ_044 not in the Motif Atlas

Geometric match to IL_6CZR_171

Geometric discrepancy: 0.3602

The information below is about IL_6CZR_171

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

183

Unit IDs

7PKQ|1|4|U|338
7PKQ|1|4|A|339
7PKQ|1|4|C|340
*
7PKQ|1|4|G|383
7PKQ|1|4|C|384
7PKQ|1|4|G|385

Current chains

Chain 4

S4 rRNA

Nearby chains

Chain 2

S2 rRNA