IL_7PKQ_060

3D structure

PDB id

7PKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of the Chlamydomonas reinhardtii mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AGC*GU

Length

5 nucleotides

Bulged bases

7PKQ|1|3|G|340

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PKQ_060 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.486

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

7PKQ|1|3|A|339
7PKQ|1|3|G|340
7PKQ|1|3|C|341
*
7PKQ|1|4|G|301
7PKQ|1|4|U|302

Current chains

Chain 3

S3 rRNA

Chain 4

S4 rRNA

Nearby chains