IL_7PNY_028
3D structure
- PDB id
- 7PNY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- AUAUC*GCCCU
- Length
- 10 nucleotides
- Bulged bases
- 7PNY|1|A|A|1188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PNY_028 not in the Motif Atlas
- Geometric match to IL_4V9F_051
- Geometric discrepancy: 0.2029
- The information below is about IL_4V9F_051
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
7PNY|1|A|A|1186
7PNY|1|A|U|1187
7PNY|1|A|A|1188
7PNY|1|A|U|1189
7PNY|1|A|C|1190
*
7PNY|1|A|G|1464
7PNY|1|A|C|1465
7PNY|1|A|C|1466
7PNY|1|A|C|1467
7PNY|1|A|U|1468
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
Coloring options: