3D structure

PDB id
7PNZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
CUUGCUCAG*CCCAUG
Length
15 nucleotides
Bulged bases
7PNZ|1|A|C|1250
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PNZ|1|A|C|1244
7PNZ|1|A|U|1245
7PNZ|1|A|U|1246
7PNZ|1|A|G|1247
7PNZ|1|A|C|1248
7PNZ|1|A|U|1249
7PNZ|1|A|C|1250
7PNZ|1|A|A|1251
7PNZ|1|A|G|1252
*
7PNZ|1|A|C|1340
7PNZ|1|A|C|1341
7PNZ|1|A|C|1342
7PNZ|1|A|A|1343
7PNZ|1|A|U|1344
7PNZ|1|A|G|1345

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 4
Pentatricopeptide repeat domain-containing protein 3, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain K
28S ribosomal protein S14, mitochondrial
Chain Z
28S ribosomal protein S33, mitochondrial

Coloring options:

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