3D structure

PDB id
7PO0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UGGUCAAUUU*AUUA
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PO0|1|A|U|876
7PO0|1|A|G|877
7PO0|1|A|G|878
7PO0|1|A|U|879
7PO0|1|A|C|880
7PO0|1|A|A|881
7PO0|1|A|A|882
7PO0|1|A|U|883
7PO0|1|A|U|884
7PO0|1|A|U|885
*
7PO0|1|A|A|910
7PO0|1|A|U|911
7PO0|1|A|U|912
7PO0|1|A|A|913

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain D
28S ribosomal protein S5, mitochondrial
Chain J
28S ribosomal protein S12, mitochondrial
Chain O
28S ribosomal protein S18b, mitochondrial
Chain Z
28S ribosomal protein S33, mitochondrial
Chain a
Putative ribosome-binding factor A, mitochondrial

Coloring options:

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