IL_7PO4_002
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 7PO4|1|A|C|1769
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PO4_002 not in the Motif Atlas
- Geometric match to IL_7KGA_004
- Geometric discrepancy: 0.3508
- The information below is about IL_7KGA_004
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 60
Unit IDs
7PO4|1|A|C|1682
7PO4|1|A|C|1683
*
7PO4|1|A|G|1768
7PO4|1|A|C|1769
7PO4|1|A|G|1770
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: