IL_7PO4_015
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CCCACAG*CCCCUUG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PO4_015 not in the Motif Atlas
- Geometric match to IL_5XWG_002
- Geometric discrepancy: 0.2425
- The information below is about IL_5XWG_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74768.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7PO4|1|A|C|2057
7PO4|1|A|C|2058
7PO4|1|A|C|2059
7PO4|1|A|A|2060
7PO4|1|A|C|2061
7PO4|1|A|A|2062
7PO4|1|A|G|2063
*
7PO4|1|A|C|2076
7PO4|1|A|C|2077
7PO4|1|A|C|2078
7PO4|1|A|C|2079
7PO4|1|A|U|2080
7PO4|1|A|U|2081
7PO4|1|A|G|2082
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: