IL_7PO4_034
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CCA*UAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PO4_034 not in the Motif Atlas
- Geometric match to IL_4WF9_042
- Geometric discrepancy: 0.0958
- The information below is about IL_4WF9_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
7PO4|1|B|C|28
7PO4|1|B|C|29
7PO4|1|B|A|30
*
7PO4|1|B|U|40
7PO4|1|B|A|41
7PO4|1|B|G|42
Current chains
- Chain B
- tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain e
- 39S ribosomal protein L46, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain m
- 39S ribosomal protein L55, mitochondrial
Coloring options: