IL_7PWG_002
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CCG*C(OMG)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_002 not in the Motif Atlas
- Geometric match to IL_4E59_001
- Geometric discrepancy: 0.1493
- The information below is about IL_4E59_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
7PWG|1|1|C|8
7PWG|1|1|C|9
7PWG|1|1|G|10
*
7PWG|1|4|C|132
7PWG|1|4|OMG|133
7PWG|1|4|G|134
Current chains
- Chain 1
- rRNA 28S
- Chain 4
- rRNA 5.8S
Nearby chains
- Chain G
- 60S ribosomal protein L7a
- Chain N
- Ribosomal protein L15
- Chain X
- Ribosomal protein L23A
Coloring options: