IL_7PWG_011
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CUGAACC*GCGGAUG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_011 not in the Motif Atlas
- Homologous match to IL_5TBW_015
- Geometric discrepancy: 0.0928
- The information below is about IL_5TBW_015
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.7
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7PWG|1|1|C|353
7PWG|1|1|U|354
7PWG|1|1|G|355
7PWG|1|1|A|356
7PWG|1|1|A|357
7PWG|1|1|C|358
7PWG|1|1|C|359
*
7PWG|1|4|G|14
7PWG|1|4|C|15
7PWG|1|4|G|16
7PWG|1|4|G|17
7PWG|1|4|A|18
7PWG|1|4|U|19
7PWG|1|4|G|20
Current chains
- Chain 1
- rRNA 28S
- Chain 4
- rRNA 5.8S
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain P
- Ribosomal protein L17
- Chain e
- Ribosomal protein L32
Coloring options: