IL_7PWG_017

3D structure

PDB id

7PWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GC*GGC

Length

5 nucleotides

Bulged bases

7PWG|1|1|G|576

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PWG_017 not in the Motif Atlas

Homologous match to IL_8C3A_032

Geometric discrepancy: 0.1227

The information below is about IL_8C3A_032

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

7PWG|1|1|G|549
7PWG|1|1|C|550
*
7PWG|1|1|G|575
7PWG|1|1|G|576
7PWG|1|1|C|577

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain A

Ribosomal protein L2

Chain R

Ribosomal protein L19

Chain p

Ribosomal protein L37a