IL_7PWG_028
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CCU*ACG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_028 not in the Motif Atlas
- Homologous match to IL_5TBW_046
- Geometric discrepancy: 0.2046
- The information below is about IL_5TBW_046
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7PWG|1|1|C|829
7PWG|1|1|C|830
7PWG|1|1|U|831
*
7PWG|1|1|A|845
7PWG|1|1|C|846
7PWG|1|1|G|847
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain F
- Ribosomal protein L7
- Chain T
- Ribosomal protein L21
- Chain b
- 60S ribosomal protein L29
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