IL_7PWG_035
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGGCGAAG*CGGAC
- Length
- 13 nucleotides
- Bulged bases
- 7PWG|1|1|C|1079
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_035 not in the Motif Atlas
- Homologous match to IL_5TBW_059
- Geometric discrepancy: 0.1827
- The information below is about IL_5TBW_059
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
7PWG|1|1|G|1076
7PWG|1|1|G|1077
7PWG|1|1|G|1078
7PWG|1|1|C|1079
7PWG|1|1|G|1080
7PWG|1|1|A|1081
7PWG|1|1|A|1082
7PWG|1|1|G|1083
*
7PWG|1|1|C|1102
7PWG|1|1|G|1103
7PWG|1|1|G|1104
7PWG|1|1|A|1105
7PWG|1|1|C|1106
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 4
- rRNA 5.8S
- Chain C
- Ribosomal protein L4
- Chain P
- Ribosomal protein L17
- Chain Y
- Ribosomal protein L26
- Chain e
- Ribosomal protein L32
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