IL_7PWG_045
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGCAG*CCCGG
- Length
- 10 nucleotides
- Bulged bases
- 7PWG|1|1|G|1405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_045 not in the Motif Atlas
- Geometric match to IL_6JXM_002
- Geometric discrepancy: 0.3252
- The information below is about IL_6JXM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14445.1
- Basepair signature
- cWW-L-tHS-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
7PWG|1|1|C|1368
7PWG|1|1|G|1369
7PWG|1|1|C|1370
7PWG|1|1|A|1371
7PWG|1|1|G|1372
*
7PWG|1|1|C|1402
7PWG|1|1|C|1403
7PWG|1|1|C|1404
7PWG|1|1|G|1405
7PWG|1|1|G|1406
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain R
- Ribosomal protein L19
- Chain g
- Ribosomal protein L34
Coloring options: