IL_7PWG_047
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCGAAC*GCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_047 not in the Motif Atlas
- Geometric match to IL_5J7L_304
- Geometric discrepancy: 0.1326
- The information below is about IL_5J7L_304
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7PWG|1|1|G|1514
7PWG|1|1|C|1515
7PWG|1|1|G|1516
7PWG|1|1|A|1517
7PWG|1|1|A|1518
7PWG|1|1|C|1519
*
7PWG|1|1|G|1834
7PWG|1|1|C|1835
7PWG|1|1|C|1836
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain B
- Ribosomal protein L3
- Chain P
- Ribosomal protein L17
- Chain d
- Ribosomal protein L31B
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