IL_7PWG_066
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- U(OMU)(OMU)U*ACA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_066 not in the Motif Atlas
- Geometric match to IL_4ZC7_001
- Geometric discrepancy: 0.2164
- The information below is about IL_4ZC7_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
7PWG|1|1|U|1895
7PWG|1|1|OMU|1896
7PWG|1|1|OMU|1897
7PWG|1|1|U|1898
*
7PWG|1|1|A|2233
7PWG|1|1|C|2234
7PWG|1|1|A|2235
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain a
- Ribosomal protein L27a
- Chain b
- 60S ribosomal protein L29
Coloring options: