IL_7PWG_078
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CCGAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_078 not in the Motif Atlas
- Homologous match to IL_8C3A_114
- Geometric discrepancy: 0.1571
- The information below is about IL_8C3A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7PWG|1|1|C|2257
7PWG|1|1|C|2258
7PWG|1|1|G|2259
7PWG|1|1|A|2260
7PWG|1|1|G|2261
*
7PWG|1|1|C|2271
7PWG|1|1|G|2272
7PWG|1|1|A|2273
7PWG|1|1|C|2274
7PWG|1|1|G|2275
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain I
- Ribosomal protein L10
- Chain m
- Ubiquitin/Ribosomal protein L40e
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