IL_7PZY_082
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 7PZY|1|1|U|1927
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_082 not in the Motif Atlas
- Geometric match to IL_4V9F_063
- Geometric discrepancy: 0.0662
- The information below is about IL_4V9F_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PZY|1|1|C|1914
7PZY|1|1|G|1915
7PZY|1|1|U|1916
7PZY|1|1|A|1917
7PZY|1|1|A|1918
7PZY|1|1|C|1919
*
7PZY|1|1|G|1924
7PZY|1|1|G|1925
7PZY|1|1|A|1926
7PZY|1|1|U|1927
7PZY|1|1|A|1928
7PZY|1|1|A|1929
7PZY|1|1|G|1930
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain AO
- 60S ribosomal protein L41
- Chain AQ
- Ribosomal 60S subunit protein L43A
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