3D structure

PDB id
7PZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the vacant Candida albicans 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.32 Å

Loop

Sequence
UAGAUAAAAAUUUG*CAUA
Length
18 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PZY|1|A|U|210
7PZY|1|A|A|211
7PZY|1|A|G|212
7PZY|1|A|A|213
7PZY|1|A|U|214
7PZY|1|A|A|215
7PZY|1|A|A|216
7PZY|1|A|A|217
7PZY|1|A|A|218
7PZY|1|A|A|219
7PZY|1|A|U|238
7PZY|1|A|U|239
7PZY|1|A|U|240
7PZY|1|A|G|241
*
7PZY|1|A|C|248
7PZY|1|A|A|249
7PZY|1|A|U|250
7PZY|1|A|A|251

Current chains

Chain A
18S ribosomal RNA

Nearby chains

Chain F
40S ribosomal protein S4
Chain H
40S ribosomal protein S6
Chain J
40S ribosomal protein S8
Chain M
Ribosomal 40S subunit protein S11A

Coloring options:

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