IL_7PZY_190

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GUUA*UC

Length

6 nucleotides

Bulged bases

7PZY|1|A|U|804, 7PZY|1|A|U|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_190 not in the Motif Atlas

Geometric match to IL_7V9E_001

Geometric discrepancy: 0.2247

The information below is about IL_7V9E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7PZY|1|A|G|803
7PZY|1|A|U|804
7PZY|1|A|U|805
7PZY|1|A|A|806
*
7PZY|1|A|U|836
7PZY|1|A|C|837

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain z

Ribosomal protein L19